PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN00882.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 507aa    MW: 55865.9 Da    PI: 6.9115
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN00882.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000524044361855
                 HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++  L++++ +      +K + a++L +A+ YIk Lq
  KHN00882.1 404 DKITALQQIVSPF-----GKTDTASVLFEAIGYIKFLQ 436
                 7888889988887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.642386435IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-9401452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-8401443IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-4404440No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MTEESAGNTV ATSITPFNWW YLQANSLSSW NDTNSTWNSQ PNPNSSSSCE EDISVSTSFT  60
NASNHSSLTV ESSRRLIEPP APSSNELMGE HASDNQLWSH VLSGVGSNGE LHNGQEIGEN  120
FLDALSSKSM TSTMFQPVCD YLKKLDHTSW EYNGPTSLNS FEKHLNGFSE AMIENNERLT  180
KLSNLVSTWS IAPPDPEVSS HFDPQTNNMS LSSNSMDHHF PQSEHFKQPF RDSTSSCSLG  240
GASRSSGVIP NCYDHDMKVK QEYHASEVPP GAVFGKTLNA NGFNSLSVGD SCKLYHGMPN  300
ISSCTRNFSD VISFNSRLGR PVIGVHSQKP SMKYLNVSES KKQGLQTPSP PIRTNVNGKG  360
EGTTREVKKK RSEESSDAML KKPKQDTSTA SSSKVQAPKV KLGDKITALQ QIVSPFGKTD  420
TASVLFEAIG YIKFLQEQVQ LLSNPYLKAN THKDPWGSLD RKDKEDTKLD LRSRGLCLVP  480
TSCTPLVYRD SSGPDYWTPA YRGCLYR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0926770.0BT092677.1 Soybean clone JCVI-FLGm-11D9 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014627709.10.0PREDICTED: uncharacterized protein LOC100527800 isoform X1
TrEMBLA0A0B2NZJ70.0A0A0B2NZJ7_GLYSO; Transcription factor bHLH111
TrEMBLI1NHJ50.0I1NHJ5_SOYBN; Uncharacterized protein
STRINGGLYMA20G32520.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.13e-64bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]